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18 May 2021: Database Analysis

Identification of a DNA Methylation-Based Prognostic Signature for Patients with Triple-Negative Breast Cancer

Yinqi Gao 1ABCE , Xuelong Wang 2AC , Shihui Li 1CE , Zhiqiang Zhang 1CE , Xuefei Li 1CE , Fangcai Lin 1AE*

DOI: 10.12659/MSM.930025

Med Sci Monit 2021; 27:e930025

Supplementary Table 1 List of prognosis-related differentially methylated sites.

ProbeCoefHRP.valueGene symbol
cg00311768−4.363420.0127350.047414TSTA3
cg004115959.49933913350.90.041674SLC2A6
cg00666842−2.908910.0545350.016011SMYD1
cg0069983124.289873.54E+100.015735SCD
cg01119512−11.48911.02E-050.044574GRHL3
cg01414194−4.132260.0160470.022339TSTA3
cg018203745.957623386.68970.048866LAG3
cg021872318.5325355077.3020.015247VAX2
cg022227283.9571352.306980.039254SOX17
cg023119324.740023114.43680.034187RBM24
cg0236977512.83755376076.60.033092IGFBP6
cg024621953.2593726.033130.029795ADAMTS5
cg0319900645.44025.43E+190.002709CXCL9
cg033230674.31019574.4550.034005TNS1
cg03709663−3.910680.0200270.029031GINS2
cg04370730−4.407060.0121910.034052GJB3
cg04454576−5.046140.0064340.009928ASCL2
cg0445602913.33355617569.60.047443DTX1
cg04833514−4.032340.0177330.013399SLC6A9
cg05008975−3.40410.0332370.047412SCN4B
cg0552609919.152692.08E+080.030173CHI3L1
cg058146543.50714933.353050.042772IL21R
cg061953794.665694106.23930.046127IL32
cg07210669−4.590450.0101480.012612S100P
cg077124932.60134813.481890.027394CDO1
cg07747553−5.139310.0058620.049336RASD2
cg07763231−4.412220.0121280.021462SLC16A3
cg07991704−3.39050.0336920.008325SLC4A4
cg08142094−4.460220.011560.031394GINS2
cg08480266−3.15280.0427320.043551LGI4
cg08816023−3.387110.0338060.03887FGF1
cg09183450−5.504680.0040680.010343AHNAK
cg09284708−5.514810.0040270.013559MOCS1
cg09340386−2.324790.0978040.041455TPO
cg09757109−3.362920.0346340.037446DIXDC1
cg10140583−3.922090.01980.008001LY6D
cg10241809−6.368230.0017150.045466SLC16A3
cg102703063.96201152.562940.042718AKAP12
cg107253162.87182617.669240.034809KCNIP2
cg1084696964.185827.51E+270.014242CENPW
cg10988368−5.05490.0063780.005625ASCL2
cg113482496.264056525.34560.032164AKAP12
cg11580525−3.57060.0281390.045714SCN4B
cg11644479−3.087380.0456210.035826ASCL2
cg12574296−3.584370.0277540.0409NCCRP1
cg1298965022.128754.08E+090.036625ARHGEF15
cg135512273.62447437.504980.033813KCNIP2
cg13681655−4.503360.0110720.036481SDC1
cg139368637.8857562659.1340.015535VAX2
cg1397150412.29604218828.70.012028GCNT4
cg14042396−5.035890.00650.013656MYCN
cg14171514−3.698610.0247580.032232AHNAK
cg142357685.698774298.50120.048681VAX2
cg14588178−3.531850.0292510.039197GDF10
cg15108410−3.837480.0215480.019046COL2A1
cg15171154−6.353850.001740.047176TGFBR2
cg15724876−4.249380.0142730.005053TGFBR2
cg1635049426.974875.19E+110.02856FOXP3
cg173067402.58621313.279380.047608ZBP1
cg175205395.614495274.37490.028113AKAP12
cg17863139−5.85160.0028750.048414LAD1
cg17887364−3.665610.0255890.008412EIF4EBP1
cg179670594.15392563.68350.04683GJB2
cg18183642−4.050770.0174090.014428SLC6A9
cg18250832−7.239070.0007180.022473NMUR1
cg18438461−2.225670.1079950.044718TPO
cg1856795413.8381610229130.027343DTX1
cg18825531−4.728940.0088360.042292AHNAK
cg18967533−4.3660.0127020.019672KLK6
cg19419246−4.164630.0155350.004675FOSB
cg194212187.6106932019.6780.028452TIGIT
cg19570321−3.523850.0294860.020144HRASLS5
cg1969928916.14231102451480.040794VAX2
cg199145547.2272661376.4540.049081CD7
cg20000220−3.476430.0309180.043647MAPK15
cg20062691−4.743990.0087040.009959ISG15
cg20392764−4.675570.009320.008544ASCL2
cg20518446−1.981470.1378660.048057AHNAK
cg20914659−3.898540.0202710.018332KCNK5
cg20989454−4.307450.0134680.032761IRF7
cg21083175−3.882210.0206050.036995RCOR2
cg21166775−5.215590.0054310.016962RAPGEF3
cg21214613−6.409360.0016460.019865HSPB7
cg212345064.27084871.582320.004655BCL2A1
cg215803762.5475212.775390.009966ADRB2
cg22077313−6.308060.0018220.019035S100P
cg228336187.060311164.8060.0212HRC
cg22946658−4.780560.0083910.00482ASCL2
cg23492779−4.970620.0069390.012658PI16
cg23568324−4.314160.0133780.040389TTYH3
cg235882173.81498345.375980.036747TBX15
cg24617203−3.285970.0374040.01673IL1R2
cg25433648−4.19920.0150080.038807S100A14
cg25714865−2.590330.0749950.010923FSCN1
cg25752754−4.470790.0114380.00175SDC1
cg26051413−2.601560.0741580.03539ASCL2
cg26584545−3.833070.0216430.017717NTN4
cg27146050−5.999870.0024790.040453HIF3A
cg27245646−2.731640.0651130.032031PODXL2
cg2734710419.932384.53E+080.043137VWF
cg27409154−4.056480.017310.043397IGFBP6
cg27450924−3.541340.0289740.023418ARL9
ch.1.4190055F10.8423951143.430.028872CENPF
Coef – regression coefficients; HR – hazard ratio.

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Medical Science Monitor eISSN: 1643-3750
Medical Science Monitor eISSN: 1643-3750