05 July 2021>: Clinical Research
Identification and Characterization of Non-Coding RNAs in Thymoma
Guanglei Ji 1AE , Rongrong Ren 2BCDF , Xichao Fang 3BCDF*DOI: 10.12659/MSM.929727
Med Sci Monit 2021; 27:e929727
Table 1 Basic characteristics of considered small RNA-seq data.
Run ID | Average spot length | Bases (Mbase) | Data size (MB) | Data file format | Sample type | WHO sub-type |
---|---|---|---|---|---|---|
SRR3341111 | 46 | 705.93 | 292.9 | bam,sra | Thymic neoplasm | A |
SRR3341114 | 45 | 497.06 | 230.71 | bam,sra | Thymic neoplasm | A |
SRR3341117 | 44 | 472.92 | 231.16 | bam,sra | Thymic neoplasm | A |
SRR3341120 | 43 | 380.61 | 191.63 | bam,sra | Thymic neoplasm | A/B |
SRR3341123 | 44 | 438.40 | 207.93 | bam,sra | Thymic neoplasm | B3 |
SRR3341126 | 44 | 368.09 | 177.25 | bam,sra | Thymic neoplasm | B3 |
SRR3341129 | 46 | 696.30 | 309.79 | bam,sra | Thymic neoplasm | A |
SRR3341132 | 46 | 661.74 | 279.82 | bam,sra | Thymicneoplasm | B3 |
SRR3341135 | 46 | 626.43 | 266.13 | bam,sra | Thymic neoplasm | A/B |
SRR3341144 | 41 | 246.58 | 143.25 | bam,sra | Thymic neoplasm | C |
SRR3341146 | 79 | 3156.80 | 1669.12 | bam,sra | Thymic neoplasm | C |
SRR3341150 | 46 | 776.60 | 349.51 | bam,sra | Normal thymus | – |
SRR3341151 | 46 | 689.80 | 315.14 | bam,sra | Normal thymus | – |
SRR3341152 | 80 | 2253.16 | 1285.14 | bam,sra | Normal thymus | – |
SRR3341153 | 45 | 700.13 | 334.67 | bam,sra | Normal thymus | – |
SRR3341154 | 44 | 630.27 | 307.39 | bam,sra | Normal thymus | – |
SRR3341155 | 79 | 2352.09 | 1394.3 | bam,sra | Normal thymus | – |
SRR3341156 | 45 | 711.40 | 337.3 | bam,sra | Normal thymus | – |
SRR3341157 | 44 | 636.42 | 307.0 | bam,sra | Normal thymus | – |
SRR3341158 | 78 | 2289.89 | 1370.73 | bam,sra | Normal thymus | – |