26 October 2020: Database Analysis
Small Nucleolar RNAs (snoRNAs)-Based Risk Score Classifier Predicts Overall Survival in Bladder Carcinoma
Rong-Quan He 1A , Zhi-Guang Huang 2C , Gao-Qiang Zhai 3C , Su-Ning Huang 4ACDEF , Yong-Yao Gu 2BEF , Gang Chen 2ACDEF , Jie Ma 1B , Ji-Wen Cheng 3ACE , Hai-Biao Yan 3ADEF , Sheng-Hua Li 3A*DOI: 10.12659/MSM.926273
Med Sci Monit 2020; 26:e926273
Table 2 General characteristics of prognosis-related snoRNAs in BLCA.
| SnoRNA | Ensemble id | Chromosome location | HR | Z-score | P-value |
|---|---|---|---|---|---|
| SNORD114-1 | ENSG00000199575 | chr14_101416169_101416241 | 1.172157633 | 4.042243541 | 5.29E-05 |
| SNORD114-3 | ENSG00000201839 | chr14_101419685_101419760 | 1.244460803 | 3.989900024 | 6.61E-05 |
| SNORD114-23 | ENSG00000200406 | chr14_101450212_101450284 | 1.200432991 | 3.967968648 | 7.25E-05 |
| SNORD114-14 | ENSG00000199593 | chr14_101438439_101438514 | 1.225257693 | 3.841568643 | 0.000122251 |
| SNORD114-26 | ENSG00000200413 | chr14_101453382_101453454 | 1.177498875 | 3.574101976 | 0.000351432 |
| SNORD114-27 | ENSG00000200636 | chr14_101454497_101454567 | 1.204509378 | 3.572399323 | 0.000353725 |
| SNORD114-10 | ENSG00000200279 | chr14_101433388_101433460 | 1.195695701 | 3.544136258 | 0.000393902 |
| SNORD114-22 | ENSG00000202293 | chr14_101449262_101449334 | 1.184810744 | 3.510696121 | 0.000446935 |
| SNORD114-21 | ENSG00000272344 | chr14_101448311_101448383 | 1.166642474 | 3.314913224 | 0.000916716 |
| SNORD114-28 | ENSG00000200480 | chr14_101455466_101455538 | 1.181825508 | 3.300466355 | 0.000965243 |
| SNORD114-16 | ENSG00000199914 | chr14_101439931_101440001 | 1.141680142 | 3.167935272 | 0.001535257 |
| SNORD114-12 | ENSG00000202270 | chr14_101435284_101435359 | 1.167420569 | 3.09099896 | 0.001994843 |
| SNORD114-9 | ENSG00000201240 | chr14_101432365_101432437 | 1.177886029 | 3.036379423 | 0.002394379 |
| SNORD114-4 | ENSG00000200832 | chr14_101420710_101420785 | 1.196448159 | 2.980747353 | 0.002875459 |
| SNORD114-24 | ENSG00000201899 | chr14_101451113_101451185 | 1.145736023 | 2.922467683 | 0.003472697 |
| SNORD114-25 | ENSG00000200612 | chr14_101452393_101452465 | 1.168691075 | 2.897966743 | 0.003755904 |
| SNORD114-6 | ENSG00000201263 | chr14_101423502_101423574 | 1.131317371 | 2.89790986 | 0.003756585 |
| SNORD69 | ENSG00000212452 | chr3_52726751_52726828 | 0.829923328 | −2.863363869 | 0.004191689 |
| SNORA46 | ENSG00000207493 | chr16_58582402_58582537 | 0.817200622 | −2.840019864 | 0.004511072 |
| SNORA60 | ENSG00000199266 | chr20_37078011_37078147 | 0.831925367 | −2.731873135 | 0.006297539 |
| SNORD50 | ENSG00000202335 | chr12_110934157_110934226 | 1.092412377 | 2.722243241 | 0.00648404 |
| SNORD114-15 | ENSG00000201557 | chr14_101439006_101439078 | 1.125731167 | 2.630556393 | 0.008524523 |
| SNORA36B | ENSG00000222370 | chr1_220373887_220374018 | 0.7897178 | −2.621196299 | 0.008762179 |
| SNORD114-11 | ENSG00000200608 | chr14_101434447_101434522 | 1.109513238 | 2.604648921 | 0.009196844 |
| SNORA70 | ENSG00000206661 | chr8_4985801_4985934 | 0.845867576 | −2.55813685 | 0.010523467 |
| SNORD114-5 | ENSG00000199798 | chr14_101421706_101421776 | 1.130225789 | 2.552064338 | 0.010708674 |
| SNORD11B | ENSG00000271852 | chr2_203156054_203156144 | 0.874855705 | −2.535644644 | 0.011224057 |
| SNORD114-29 | ENSG00000201689 | chr14_101456427_101456497 | 1.119666412 | 2.513808912 | 0.011943513 |
| SNORD114-13 | ENSG00000201247 | chr14_101436215_101436289 | 1.127416664 | 2.445552573 | 0.014463036 |
| SNORD113-5 | ENSG00000272474 | chr14_101404523_101404601 | 1.139249056 | 2.423952021 | 0.015352634 |
| SNORD51 | ENSG00000207047 | chr2_207026602_207026681 | 0.837567821 | −2.368768099 | 0.01784744 |
| SNORD109B | ENSG00000239169 | chr15_25523489_25523556 | 0.866810843 | −2.354682907 | 0.018538518 |
| SCARNA15 | ENSG00000252193 | chr20_41933195_41933319 | 0.867935397 | −2.333853912 | 0.019603373 |
| SNORD113-6 | ENSG00000200215 | chr14_101405892_101405968 | 1.119284272 | 2.300058669 | 0.021444896 |
| SNORD114-17 | ENSG00000201569 | chr14_101441142_101441217 | 1.146335348 | 2.270526772 | 0.023175641 |
| SNORD98 | ENSG00000221182 | chr10_70514928_70514995 | 0.848508292 | −2.242967391 | 0.024898917 |
| SNORD88A | ENSG00000221241 | chr19_51302695_51302792 | 0.870328188 | −2.22784215 | 0.025891043 |
| SCARNA3 | ENSG00000252906 | chr1_175937532_175937676 | 0.842498005 | −2.207789545 | 0.027258947 |
| SNORD121B | ENSG00000238300 | chr9_33934294_33934374 | 0.881577227 | −2.199487508 | 0.027843276 |
| SNORD71 | ENSG00000223224 | chr16_71792304_71792390 | 0.828580666 | −2.172435589 | 0.029822823 |
| SNORD125 | ENSG00000239127 | chr22_29729151_29729247 | 0.866129363 | −2.151538303 | 0.031433736 |
| SNORA74B | ENSG00000212402 | chr5_172447728_172447932 | 0.836039977 | −2.129319367 | 0.033227847 |
| U49A | NA | chr17_16343349_16343420 | 1.130835565 | 2.123119267 | 0.033743859 |
| SNORD73A | ENSG00000208797 | chr4_152024978_152025043 | 0.89226166 | −2.119595454 | 0.034040176 |
| SNORA28 | ENSG00000272533 | chr14_103804185_103804311 | 0.865292844 | −2.117394539 | 0.034226377 |
| SNORA55 | ENSG00000201457 | chr1_40033045_40033182 | 0.872055098 | −2.112023658 | 0.03468442 |
| SCARNA4 | ENSG00000252808 | chr1_155895748_155895877 | 0.89074157 | −2.109787332 | 0.034876678 |
| snoU219 | ENSG00000201592 | chrX_20154424_20154503 | 0.876558632 | −2.094904314 | 0.036179499 |
| ACA24 | NA | chr4_119200344_119200475 | 0.910089166 | −2.086331357 | 0.036948618 |
| SNORD59A | ENSG00000207031 | chr12_57038810_57038885 | 0.862298053 | −2.051283898 | 0.040239308 |
| SNORD114-20 | ENSG00000202048 | chr14_101447340_101447412 | 1.090210857 | 2.041361273 | 0.041214931 |
| U59B | NA | chr12_57037463_57037538 | 0.846756387 | −2.031920052 | 0.04216175 |
| SNORD63 | ENSG00000206989 | chr5_137896731_137896799 | 0.85784948 | −2.017395329 | 0.043654274 |
| SNORD110 | ENSG00000221116 | chr20_2634857_2634932 | 0.86206084 | −2.014186617 | 0.043989944 |
| SNORD113-8 | ENSG00000200367 | chr14_101409787_101409861 | 1.115240661 | 1.999711306 | 0.045531447 |
| SNORA21 | ENSG00000199293 | chr17_37009115_37009248 | 0.897130856 | −1.982249792 | 0.04745129 |
| SNORD20 | ENSG00000207280 | chr2_232321154_232321234 | 0.861938927 | −1.981243636 | 0.047563958 |
| U74 | NA | chr1_173836811_173836883 | 0.87740203 | −1.969834633 | 0.048857326 |