Creation of a Prognostic Risk Prediction Model for Lung Adenocarcinoma Based on Gene Expression, Methylation, and Clinical Characteristics

06 October 2020: Database Analysis

Honggang Ke ^1CD* , Yunyu Wu ^2DEF* , Runjie Wang ^3CDF , Xiaohong Wu ^4AB*

DOI: 10.12659/MSM.925833

Med Sci Monit 2020; 26:e925833

Table 3 MetaQC quality control of 6 expression profiling datasets and 4 methylation profiling datasets.

	IQC	EQC	CQCg	CQCp	AQCg	AQCp	SMR
Gene expression profiling
GSE75037	5.27	3.23	106.65	158.86	32.71	90.88	1.62
GSE32863	4.38	3.16	64.14	146.51	26.46	96.74	2.42
GSE33532	4.81	3.23	59.25	171.49	25.50	84.37	2.86
GSE43458	6.09	1.10	101.10	114.30	19.53	29.46	3.92
GSE30219	6.64	3.71	83.97	107.69	47.87	63.89	4.33
GSE10072	8.06	9.19	12.24	8.92	9.78	14.52	7.76
Methylation profiling
GSE32861	9.80	5.00	19.24	41.01	6.17	24.77	3.28
GSE49996	6.22	4.96	46.70	42.02	8.67	33.56	3.14
GSE63384	7.56	3.05	24.57	33.79	3.45	17.84	5.67
GSE62948	5.11	3.63	59.25	60.27	29.49	84.37	3.25
IQC – internal quality control; EQC – external quality control; CQC – consistency quality control; AQC – accuracy quality control; SMR – standardized mean rank score.